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Pluto data models

Source: vignettes/pluto_models.Rmd
pluto_models.Rmd

Introduction to the Pluto data models

Pluto data is stored in several data models:

  • Project - collection of Experiments
  • Experiment - a data set containing
    • type - a known/predefined assay type in Pluto (e.g. rnaseq, cutandrun, proteomics)
    • Sample Data - tabular annotations and other metadata associated with samples
    • Assay Data - tabular measurements from the assay (e.g. a counts matrix for gene expression experiments)
    • Analysis - known/predefined analyses that can be run in Pluto (e.g. differential_expression, umap)
      • Results - tabular results generated by an Analysis, format depends on the kind of analysis being run